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Microbial enrichment, functional characterization and isolation from a cold seep yield piezotolerant obligate hydrocarbon degraders.
Van Landuyt J, Cimmino L, Dumolin C, Chatzigiannidou I, Taveirne F, Mattelin V, Zhang Y, Vandamme P, Scoma A, Williamson A, Boon N. Van Landuyt J, et al. Among authors: vandamme p. FEMS Microbiol Ecol. 2020 Sep 1;96(9):fiaa097. doi: 10.1093/femsec/fiaa097. FEMS Microbiol Ecol. 2020. PMID: 32436568
The effects of hydrostatic pressure (HP) in the deep sea on microbial oil degradation are poorly understood. Here, we performed long-term enrichments (100 days) from a natural cold seep while providing optimal conditions to sustain high hydrocarbon degradation rates. ...
The effects of hydrostatic pressure (HP) in the deep sea on microbial oil degradation are poorly understood. Here, we performed long-term …
A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae.
Zheng J, Wittouck S, Salvetti E, Franz CMAP, Harris HMB, Mattarelli P, O'Toole PW, Pot B, Vandamme P, Walter J, Watanabe K, Wuyts S, Felis GE, Gänzle MG, Lebeer S. Zheng J, et al. Among authors: vandamme p. Int J Syst Evol Microbiol. 2020 Apr;70(4):2782-2858. doi: 10.1099/ijsem.0.004107. Epub 2020 Apr 15. Int J Syst Evol Microbiol. 2020. PMID: 32293557
We also propose to emend the description of the family Lactobacillaceae to include all genera that were previously included in families Lactobacillaceae and Leuconostocaceae. The generic term 'lactobacilli' will remain useful to designate all organisms that were classified …
We also propose to emend the description of the family Lactobacillaceae to include all genera that were previously included in families Lact …
Introducing SPeDE: High-Throughput Dereplication and Accurate Determination of Microbial Diversity from Matrix-Assisted Laser Desorption-Ionization Time of Flight Mass Spectrometry Data.
Dumolin C, Aerts M, Verheyde B, Schellaert S, Vandamme T, Van der Jeugt F, De Canck E, Cnockaert M, Wieme AD, Cleenwerck I, Peiren J, Dawyndt P, Vandamme P, Carlier A. Dumolin C, et al. Among authors: vandamme p. mSystems. 2019 Sep 10;4(5):e00437-19. doi: 10.1128/mSystems.00437-19. mSystems. 2019. PMID: 31506264 Free PMC article.
SPeDE enables the rapid analysis and dereplication of isolates, a critical feature when long-term storage of cultures is limited or not feasible. We show that SPeDE can efficiently identify sets of similar spectra at the level of the species or strain, exceeding the taxono …
SPeDE enables the rapid analysis and dereplication of isolates, a critical feature when long-term storage of cultures is limited or n …
Phylogenomic Analysis Reveals an Asian Origin for African Burkholderia pseudomallei and Further Supports Melioidosis Endemicity in Africa.
Sarovich DS, Garin B, De Smet B, Kaestli M, Mayo M, Vandamme P, Jacobs J, Lompo P, Tahita MC, Tinto H, Djaomalaza I, Currie BJ, Price EP. Sarovich DS, et al. Among authors: vandamme p. mSphere. 2016 Mar 9;1(2):e00089-15. doi: 10.1128/mSphere.00089-15. eCollection 2016 Mar-Apr. mSphere. 2016. PMID: 27303718 Free PMC article.
We also identified substantial genetic diversity among African strains, suggesting long-term B. pseudomallei endemicity in this region....
We also identified substantial genetic diversity among African strains, suggesting long-term B. pseudomallei endemicity in this regio …
Survival or revival: long-term preservation induces a reversible viable but non-culturable state in methane-oxidizing bacteria.
Hoefman S, Van Hoorde K, Boon N, Vandamme P, De Vos P, Heylen K. Hoefman S, et al. Among authors: vandamme p. PLoS One. 2012;7(4):e34196. doi: 10.1371/journal.pone.0034196. Epub 2012 Apr 23. PLoS One. 2012. PMID: 22539945 Free PMC article.
Knowledge on long-term preservation of micro-organisms is limited and research in the field is scarce despite its importance for microbial biodiversity and biotechnological innovation. ...
Knowledge on long-term preservation of micro-organisms is limited and research in the field is scarce despite its importance for micr …
Identification of lysine positive non-fermenting gram negative bacilli (Stenotrophomonas maltophilia and Burkholderia cepacia complex).
Gautam V, Ray P, Vandamme P, Chatterjee SS, Das A, Sharma K, Rana S, Garg RK, Madhup SK, Mahajan M, Sharma M. Gautam V, et al. Among authors: vandamme p. Indian J Med Microbiol. 2009 Apr-Jun;27(2):128-33. doi: 10.4103/0255-0857.49425. Indian J Med Microbiol. 2009. PMID: 19384035 Free article.
Molecular identification and typing using recA polymerase chain reaction-restriction fragment length polymorphism was also standardized for BCC. For short-term preservation of BCC, an innovative method of preserving the bacteria in Robertson's cooked medium tubes kept in a …
Molecular identification and typing using recA polymerase chain reaction-restriction fragment length polymorphism was also standardized for …